Date: Thu, 3 Apr 2008 10:52:13 +0200 (CEST)
From: Marie Behounkova <behounek@karel.troja.mff.cuni.cz>
Subject: karlovsky klastr (kk)

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popis:
http://quantum.karlov.mff.cuni.cz/cc/

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zalogovani:
ssh user_name@kk.karlov.mff.cuni.cz

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zalogovani do fronty:
ssh fe1

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prikazy fronty (SGE fronta):
http://ait.web.psi.ch/services/linux/hpc/merlin3/sge/admin/sge_queues.html

qstat
qmon (graficke rozhrani)
qsub -pe "$parallel_env_name" "$number_of_reqest_slots" "$executable_name"
qdel cislo_procesu

druhy front
-----------
long short default int

openMP
---------------
qsub -pe thread 2 -q long run.sh

run.sh
#! /bin/bash
./a.out

MPI (tohle jsem nikdy nezkousela)
------------
qsub -pe mpi 2-5 go.sh
run.sh
#!/bin/sh
mpirun  -np $NSLOTS -machinefile $TMPDIR/machines muj_par_program

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skript pro prekladani s lapackovskou knihovnou (staticke linkovani)

export LD_LIBRARY_PATH='/opt/acml/gfotran64_mp/lib:$LD_LIBRARY_PATH'

for f in *.f90 ; do
gfortran -c -O3 -ffast-math -m64 -fopenmp -static $f;
done
gfortran *.o -O3 -ffast-math -m64 -fopenmp /opt/acml/gfortran64_mp/lib/libacml.a -o a.out